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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28203263, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRLMRHML ATLTFSMIFV ITFFAVITNY KYMENSKAML KVNNEIVVKM LKSNDVKDKK  60
   61 TIVPYIFNDS DIRISCVDQN DKLIFDSHLK NHDGEFYGKR EEIIEAREKG EGFKIRYSQS 120
  121 ENMNTMYFAK LLENGFIIRT STSLGDVSIL RGKYFIYYLI IIILSTLGAF IFASKLSSSI 180
  181 VNPIKKLEFI TSRIAAGELD RRVNINSKDE IGQLSNTFNN MADKLQYTIN DSIEKQNKLE 240
  241 AILKSMDNGV IAVDKDFKII MINPYAKEIF SIEQDIIGEN LLDKIKSYEL KEIFKEDNIE 300
  301 DYREVKILSP KEKNLRVKTT DIKIGKQLIG TVAVVQDVTE IKKLENIRSQ FVANVTHELK 360
  361 TPLTSIRGFA ETLKYVEDRE TKDKFLNIIN DESDRLTRLI NDILALSHIE NSNSMKLENI 420
  421 SINEMLEDIV YLMENSAKDK NIELFIVGDK MQPIKGDRDR FKQMMINLVD NGIKYTEEGG 480
  481 KVYIGAKKED NNCIVWVEDT GVGISKEHVE RLFERFYRVD KARSRSQGGT GLGLAIVKHI 540
  541 VLGFGGTINI ESEEGKGSKF IIRIPIKSNL V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle