YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28203058, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVKKILVIG SFMMDLVAQT PRAPIEGETI IGKSFSQFTG GKGANQAVAA ARLGAYVTMI  60
   61 GKLGKDSFGE AHIESLRREG INHDYVLFDD VESSGVGHIT LEENGNNRII VIPGANLKLT 120
  121 PKEVEDLEDN IKSSDIVILQ LEIPFETVYK TIELAHKHGK TIILNPAPAA KLKEHFVELV 180
  181 DYIVPNESEA SLLTGIKVNS IESARKAAKS LLNLGCKNVI ITLGEKGVLL VNNNEEIFQE 240
  241 SFKVKPVDTT AAGDSFIGAF AYSLANGLGN VKSLEFACAV GALTVTKIGA QPSLPKLTEV 300
  301 EMFMKENR

Type	Start	End	Confidence
Signal Peptide	1	18	0.60
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	308	0.99