YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28210528, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFKFKKTLV FFMLLIFSFS ILGCSKGTSG SEKKFKAGKY TAEAKGHNAP LKVEVEVDDS  60
   61 SIKEIKILEH KETPGISDAA LKDIPKGIVE AQTLAVDTIS GATITSNAVI VAITEALKQA 120
  121 GGNIDELKKK SKDEDVKKEQ VTKETDVIVV GAGGAGMSAA VAAAEKGAKV IVLEKMPMIG 180
  181 GNTIRSGGAY NAVDVERQKA QGIEDSIDKH YTQTYEGGDK KGESKLVKIL VENSLEGKKW 240
  241 LESYDMKFND KIGSVVGSLW PRTHQASDPA GIGYMNALKK AADKHKVEIL LNTKATELIM 300
  301 NNGKVVGVKA EGEKNLYEIK SKKAVVMASG GFAANVEMRT KYVPNLTKDM KTTNHPGATG 360
  361 DGIVMGEKVG ADLVGMEYIQ LLPMAIELTG PTINVENSIF INKEGNRFIN EDNRRDKLCE 420
  421 AILKQKDGQY YMINDSQIVK ETNELGDKIS ELIEKGVVKK ADNLDELAKA IGVPVENLKK 480
  481 SVEEFNKAVD KKSDAFGRGV WKNKIEKGPF YATLRYPAVH HTMGGLKINE KTQVLDKSGK 540
  541 VIPGFYAAGE ITGGIHGGNR LGGNALPDTI VFGKIAGENA ANEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle