YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28210295, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTLSILVV FLVSMLLIIG CGNKNTSNKG NDKNNKSLST LEKIKKDGVL KMGLNDTYPP  60
   61 MEFRDESHNL VGFDVDLGKE IAKKLGVKLE IITNDWSGIV LSLKSKKYDM ILSTMSITEE 120
  121 RKKEMNFSEP YIVGGQKLVV KKDEKDIKKV EDLKGKVIGC QMGTTGEVSA NKIEGIKELK 180
  181 KYDGVTQAFN DLSVGRINAV IADGQVAGYY LKKRSGDLVL LDTKLTSEPV GIGFRKEDTD 240
  241 IRDEVQKTLD ELKKEGTLSK LSEKWFGYDI YK

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	272	0.99