YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28210107, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFFLFFGKN KIEIHIISRE CISMKNRRIS FKKGILYFLI AAICYSAVHV FFSPYSKALN  60
   61 VIAYNYGSKG GDVSEIQKKL KNWGYYDGSV DGIYGYKTFL AVKKFQGKNG LNVDGVAGNK 120
  121 TLAALGINVA QAQGSNTSNN QDINLLARLI NGEARGEPYE GQVAVGAVIL NRTRDPRFPN 180
  181 TIAGVVYQPL AFTAIADGQV NAAMEQSSMK AAMDAINGWD PSGGAVYYFN PATATSSWIW 240
  241 SRPLIKVIGK HRFCK

Type	Start	End	Confidence
Cytoplasmic	1	33	0.95
Transmembrane Helix	34	52	0.95
Non-Cytoplasmic	53	255	0.97