YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28202472, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLRIRREL YMLKIKKIIG LVLASAITLT SFVGCSNGAG NQKGKDNGQN LTIYCGLMED  60
   61 YMVVAVKEFE KETGIKVDAV RMSSGEIMGR IKAEKENPKA SVWFGGPADG FIQAKKDGLL 120
  121 EKYESPSAKE IPDQFKDKEG YWTGLYKGYL GFVSNKKLLA EKGVQAPQSW EDLLKPEFKG 180
  181 QIVTANPGSS GTAYTFLATV VQVMGEEKGL DYMKKLNGQI KSYQKSGTAP GRMVGQGEAM 240
  241 VGITFLHDAI KYREEGMKDI VLSTPKEGTG YEIGGVGLLK GAPNQEVAKK FIDWCLTAKA 300
  301 QELGQTVGSY QFLTHPSAKP PQQAAELNDT KLIEYDLDWA GSHKSELIEK WNNAIK

Type	Start	End	Confidence
Signal Peptide	1	38	0.94
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	356	0.99