YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57636109, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNQFVWVIY PYLCLAIFVI GHIARYKYDQ FSWTAKSSEM IEKKRLKWGS LLFHLGIIPV  60
   61 FFGHVVGLLI PANWLEAIGV NNHIYHIGAV YIGSVFGIIT LIGMLLLTLR RLSIKNVRRL 120
  121 SSFSDIFVNI VLLIILIMGC YSTLVTNAIQ PEFDYRQTIA IWFRHLFMFS PNADLMLNVP 180
  181 WSFKLHILLG FTVFACWPFT RLVHVWSVPL SYMNRRYIVY RKNKI

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.86
Transmembrane Helix	8	26	0.96
Cytoplasmic	27	47	0.92
Transmembrane Helix	48	70	0.90
Non-Cytoplasmic	71	86	0.85
Transmembrane Helix	87	109	0.92
Cytoplasmic	110	125	0.88
Transmembrane Helix	126	145	0.95
Non-Cytoplasmic	146	184	0.88
Transmembrane Helix	185	205	0.92
Cytoplasmic	206	225	0.84