YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27468610, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPKIALTI AGTDPTGGAG VMADLKSFHA CGVYGMATIT SIVAQNTLGV QHIHNLESSW  60
   61 VKEQLDSVFD DELPQAIKTG MIATKKTMEL IQSYLKEHSN IPYVIDPVML AKSGDSLMDE 120
  121 NTKNHLQSTL LPLADVVTPN IPEAEEITGI KINDEESIRK AGQIFINEIG SKGVVIKGGH 180
  181 SADLNNAKDF LFTKNETYTF ENKRFDTKHT HGTGCTFSAV ITAELAKGRS IKDAVKKAKE 240
  241 FISLSIEHTP EIGKGRGPVN HFAYMKKVGL DDE

Type	Start	End	Confidence
Signal Peptide	1	23	0.86
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	273	0.99