YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNHC1_STAEQ
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIIMIFVSG ILTSISVYLV LSKSLIRIIM GTTLLTHAAN LFLITMGGLK HGTVPIFEKG  60
   61 TSSYVDPIPQ ALILTAIVIA FATTAFFLVL AFRTYKELGT DNVELMKGAP EDDRE

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.66
Transmembrane Helix	4	22	0.72
Cytoplasmic	23	28	0.60
Transmembrane Helix	29	49	0.80
Non-Cytoplasmic	50	70	0.79
Transmembrane Helix	71	92	0.93
Cytoplasmic	93	115	0.93