YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNHE1_STAEQ
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQFVINLL VSVIWLLVTN SYTLNNFVLG FILGLFLVYL LHRVLPGQFY LVRIYRIIML  60
   61 IITFLTELIK ANFGVLKIIL KPRIENKPGF FVYETELERD WQLVLLSNLI TLTPGTVVLG 120
  121 ISDDRKKIYI HSIDFSTKEE EIQNIKSSLE KVVRKVGEK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.48
Transmembrane Helix	21	42	0.86
Non-Cytoplasmic	43	51	0.52
Transmembrane Helix	52	74	0.79
Cytoplasmic	75	159	0.69