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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26453787, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIEAGDKIC ADAILLSANG LECIEAALTG ETLPIKKNAH AKVSDSAPLG DQINKVFSGC  60
   61 IVTNGQGVAK VVGTGSKTQV GRIANLIDTQ KVFLTPLQLK LHKLGKIFGY SGAVLFILVF 120
  121 LIQIFILGIG DISETWNIAL TTSISLAVAA IPEGLGAFTT IILSLGIKKM AEEHNGLIKR 180
  181 VSSVETLGST SVICSDKTGT LTLNKMTVTD LWIPDEKKPV LDKDDKLNLP YKNLVENYLL 240
  241 CTNSFLEKKD DGKIVEIGDP TELSVIQYGI QQGIDKDDLL VERMRLHCNP FDSTRKLMSS 300
  301 VNIVEGKPIA IIKGAPDVLV SRCKNTTWEN IQPKISEWSS KGYRVIAVAT KELAKNSKYS 360
  361 EEIIEYNLKF EGLIAMYDPP RPETKDAISK CISAGIKPVM ITGDHVDTAI AIAKEVGIFR 420
  421 NGDKALSGSE LREMSDEYLA EHVAEYSVYA RVSPEDKLKI VKAWQENDQV VAMTGDGVND 480
  481 APALKAADIG CAMGITGTDV SKEAADMILM DDNFKTIVAS VANGRKVYQT IKRVIQNVLL 540
  541 SSLAEIIIMF IGIIVFKFAY NNVLLESSGA NYDLHIFSAS QLLLINLVTD GFPAIALGIQ 600
  601 GTTDDLMNRR PYSKYESIFA RRMGWNLLWQ GVLFGFLGLV AFTIGVEFCE RNWFGVGHQL 660
  661 KQSLDALSLN SLYAGSAAAF ITLGAGVSIH ALSLMSNESI FKTSIKKCWI VYSAVIVSIS 720
  721 VIIFVSFVPD VALVFGMPKE LVSKGWIIIL ISLFLAIVPL IIMELYKLTY KLVSKEVMSV 780
  781 ATISNFEMIR RPQRKVKRNI FARK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle