YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26251263, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLPIQQCN LVLPGSNYEQ TYRNKSMTMT RLKISKTLLA VMLTSAVATG SAYAENNAQT  60
   61 TNESAGQKVD SSMNKVGNFM DDSAITAKVK AALVDHDNIK STDISVKTDQ KVVTLSGFVE 120
  121 SQAQAEEAVK VAKGVEGVTS VSDKLHVRDA KEGSVKGYAG DTATTSEIKA KLLADDIVPS 180
  181 RHVKVETTDG VVQLSGTVDS QAQSDRAESI AKAVDGVKSV KNDLKTK

Type	Start	End	Confidence
Signal Peptide	1	54	0.68
N-region	1	45
H-region	46	51
C-region	52	54
Cleavage Site	54	55
Non-Cytoplasmic	55	227	0.99