YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26111479, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPCTGKEPE MINPNPKRSD EPVFWGLFGA GGMWSAIIAP VMILLVGILL PIGLFPGDAL  60
   61 SYERVLAFAQ SFIGRVFLFL MIVLPLWCGL HRMHHAMHDL KIHVPAGKWV FYGLAAILTV 120
  121 VTLIGVVTI

Type	Start	End	Confidence
Cytoplasmic	1	23	0.86
Transmembrane Helix	24	54	0.79
Non-Cytoplasmic	55	66	0.80
Transmembrane Helix	67	90	0.86
Cytoplasmic	91	108	0.78
Transmembrane Helix	109	128	0.94
Non-Cytoplasmic	129	129	0.88