YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26250987, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWFPALLF SLCVSGESSA WNNIVFYSLG NVNSYQGGNV VITQRPQFIT SWRPGIATVT  60
   61 WNQCNGPEFA DGSWAYYREY IAWVVFPKKV MTQNGYPLFI EVHNKGSWSE ENTGDNDSYF 120
  121 FLKGYKWDER AFDAGNLCQK PGETTRLTEK FDDIIFKVAL PADLPLGDYS VKIPYTSGMQ 180
  181 RHFASYLGAR FKIPYNVAKT LPRENEMLFL FKNIGGCRPS AQSLEIKHGD LSINSANNHY 240
  241 AAQTLSVSCD VPANIRFMLL RNTTPTYSHG KKFSVGLGHG WDSIVSVNGV DTGETTMRWY 300
  301 KAGTQNLTIG SRLYGESSKI QPGVLSGSAT LLMILP

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	336	0.99