YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26111341, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPLTLTGT GGAQGVPAWG CECAACARAR RSPQYRRQPC SGVVKFNDAI TLIDAGLHDL  60
   61 ADRWSPGSFQ QFLLTHYHMD HVQGLFPLRW GVCDTIPVYG PPDEQGCDDL FKHPGLLDFS 120
  121 HTVEPFVVFD LQGLQVTPLP LNHSKLTFGY LLETAHSRVA WLSDTAGLPE KTLKFLRNNQ 180
  181 PQVMVIDCSH PPREDAPRNH CDLNTVLALN QVIRSPRVIL THISHQFDAW LMENALPSGF 240
  241 EAGFDGMEIE VA

Type	Start	End	Confidence
Signal Peptide	1	20	0.82
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	252	0.99