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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26250172, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQFTQNTAM PSSLWQYWRG LSGWNFYFLV KFGLLWAGYL NFHPLLNLVF AAFLLMPIPR  60
   61 YSLHRLRHWI ALPIGFALFW HDTWLPGPES IMSQGSQVAG FSTDYLIDLV TRFINWQMIG 120
  121 AIFVLFVAWL FLSQWIRITV FVVAILLWLN VLTLAGPSFS LWPAGQPTTT VTTTGGNAAA 180
  181 TVAATGGAPV VGDIPAQTAP PTTANLNAWL NNFYNAEAKR KSIFPSSLPA DAQPFELLVI 240
  241 NICSLSWSDI EAAGLMSHPL WSHFDIEFKN FNSATSYSGP AAIRLLRASC GQTSHTNLYQ 300
  301 PANNDCYLFD NLSKLGFTQH LMMGHNGQFG GFLKEVRENG GMQSELMDQT NLPVILLGFD 360
  361 GSPVYDDTAV LNRWLDVTEK DKNSRSATFY NTLPLHDGNH YPGVSKTADY KARAQKFFDE 420
  421 LDAFFTELEK SGRKVMVVVV PEHGGALKGD RMQVSGLRDI PSPSITDVPV GVKFFGMKAP 480
  481 HQGAPIVIDQ PSSFLAISDL VVRVLDGKIF SEDNVDWKKL TSGLPQTAPV SENSNAVVIQ 540
  541 YQDKPYVRLN GGDWVPYPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle