YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|226899060, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLFSYHSGT RAGIMKKQTQ LLSALALSVG LTLSASFQAV ASIPGQVADQ APLPSLAPML  60
   61 EKVLPAVVSV RVEGTASQGQ KIPEEFKKFF GDDLPDQPAQ PFEGLGSGVI INANKGYVLT 120
  121 NNHVINQAQK ISIQLNDGRE FDAKLIGSDD QSDIALLQIQ NPSKLTQIAI ADSDKLRVGD 180
  181 FAVAVGNPFG LGQTATSGII SALGRSGLNL EGLENFIQTD ASINRGNSGG ALLNLNGELI 240
  241 GINTAILAPG GGSVGIGFAI PSNMARTLAQ QLIDFGEIKR GLLGIKGTEM SADIAKAFNL 300
  301 DVQRGAFVSE VLPGSGSAKA GVKAGDIITS LNGKPLNSFA ELRSRIATTE PGTKVKLGLL 360
  361 RNGKPLEVEV TLDTSTSSSA SAEMITPALE GATLSDGQLK DGGKGIKIDE VVKGSPAAQA 420
  421 GLQKDDVIIG VNRDRVNSIA EMRKVLAAKP AIIALQIVRG NESLYLLMR

Type	Start	End	Confidence
Signal Peptide	1	41	0.96
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	469	0.96