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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASST_ECOL6
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDKYRKTLV AGTVAITLGL SASGVMAAGF KPAPPAGQLG AVIVDPYGNA PLTALVDLDS  60
   61 HVISDVKVTV HGKGEKGVEI SYPVGQESLK TYDGVPIFGL YQKFANKVTV EWKENGKVMK 120
  121 DDYVVHTSAI VNNYMDNRSI SDLQQTKVIK VAPGFEDRLY LVNTHTFTAQ GXDLHWHGEK 180
  181 DKNAGILDAG PATGALPFDI APFTFIVDTE GEYRWWLDQD TFYDGRDRDI NKRGYLMGIR 240
  241 ETPRGTFTAV QGQHWYEFDM MGQVLEDHKL PRGFADATHE SIETPNGTVL LRVGKSNYRR 300
  301 DDGVHVTTIR DHILEVDKSG RVVDVWDLTK ILDPKRDALL GALDAGAVCV NVDLAHAGQQ 360
  361 AKLEPDTPFG DALGVGPGRN WAHVNSIAYD AKDDSIILSS RHQGVVKIGR DKQVKWILAP 420
  421 SKGWEKPLAS KLLKPVDANG KPITCNENGL CENSDFDFTY TQHTAWISSK GTLTIFDNGD 480
  481 GRHLEQPALP TMKYSRFVEY KIDEKKGTVQ QVWEYGKERG YDFYSPITSI IEYQADRNTM 540
  541 FGFGGSIHLF DVGQPTVGKL NEIDYKTKEV KVEIDVLSDK PNQTHYRALL VRPQQMFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle