YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26249366, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMYRYLSIAA VVLSTAFSGP ALAEGINSFS QAKAAAVKVH ADAPGTFYCG CKINWQGKKG  60
   61 VVDLQSCGYQ VRKNENRASR VEWEHVVPAW QFGHQRQCWQ DGGRKNCAKD PVYRKMESDM 120
  121 HNLQPSVGEV NGDRGNFMYS QWNGGEGQYG QCAMKVDFKE KVAEPPARAR GAIARTYFYM 180
  181 RDQYNLTLSR QQTQLFNAWD KMYPVTDWEC ERDERIAKVQ GNHNPYVQRA CQARKS

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	236	0.99