YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|237706413, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYAGKFANN LPQAARHVHG TSFCRFRNLW IMLACCAIHS PVRCAFPYTE TERRFTCKRR  60
   61 IFRIILTLCG RENMKIRALL VAMSVATVLT GCQNMDSSGL LSSGAEAFQA YSLSDAQVKK 120
  121 LSDQACQEMD SKATIAPANS EYARRLTTIS RALGDNINGQ PVNYKVYMAK DVNAFAMANG 180
  181 CIRVYSGLMD MMTDNEVEAV LGHEMGHVAL GHVKKGMQVA LGTNAIRVAA ASAGGIVGSL 240
  241 SQSQLGDLGE KLVNSQFTQR QESEADDYSY DLLRQRGISP AGLATSFEKL AKLEEGRQSS 300
  301 MFDDHPASAE RAQHIRDRMS ADGVK

Type	Start	End	Confidence
Signal Peptide	1	44	0.47
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	325	0.96