YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26248997, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARICLYGDL QRFGRRIDLR VKTGAEAIRA LATQLPAFRQ KLSDGWYQVR IAGRDVSTSG  60
   61 LTAQLHETLP DGAVIHIVPR VAGAKSGGVF QIVLGAAAIA GSFFTAGATL AAWGAAIGAG 120
  121 GMTGILFSLG ASMVLGGVAQ MLAPKARTPR TQTTDNGKQN TYFSSLDNMV AQGNVLPVLY 180
  181 GEMRVGSRVI SQEISTADEG DGGQVVVIGR

Type	Start	End	Confidence
Cytoplasmic	1	88	0.98
Transmembrane Helix	89	111	0.89
Non-Cytoplasmic	112	118	0.60
Transmembrane Helix	119	142	0.86
Cytoplasmic	143	210	0.99