YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227887570, gi...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKKSQGKIM ALPVNKRVLK ILFILFVVAF CVYLVPRVAI NFFYYPDDKI YGPDPWSAES  60
   61 VEFTAKDGTR LQGWFIPSST GPADNAIATI IHAHGNAGNM SAHWPLVSWL PERNFNVFMF 120
  121 DYRGFGKSKG TLSQAGLLDD TQSAINVVRH RSDVNPQRLV LFGQSIGGAN ILDVIGQGDR 180
  181 EGIRAVILDS TFASYATIAN QMLPGSGYLL DESYSGENYI ASVSPIPLLL IHGKADHVIP 240
  241 WQHSEKLYSL AKEPKRLILI PDGEHIDAFS DRHGDVYREQ MVDFILSALN PQN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.80
Transmembrane Helix	21	40	0.81
Non-Cytoplasmic	41	293	0.81