YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91211427, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDESISSGV LIMSKTLNII WQYLRAFVLI YACLYAGIFI ASLLPVTIPG SIIGMLILFV  60
   61 LLALQILPAK WVNPGCYVLI RYMALLFVPI GVGVMQYFDL LRAQFGPVVV SCAVSTLVVF 120
  121 LVVSWSSQLV HGERKVVGQK GSEE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	41	0.94
Non-Cytoplasmic	42	47	0.68
Transmembrane Helix	48	68	0.91
Cytoplasmic	69	77	0.82
Transmembrane Helix	78	98	0.93
Non-Cytoplasmic	99	104	0.81
Transmembrane Helix	105	125	0.94
Cytoplasmic	126	144	0.91