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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|237704573, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTMTQVAKK ILVTCALPYA NGSIHLGHML EHIQADVWVR YQRMRGHEVN FICADDAHGT  60
   61 PIMLKAQQLG ITPEQMIGEM SQEHQTDFAG FNISYDNYHS THSEENRQLS ELIYSRLKEN 120
  121 GFIKNRTISQ LYDPEKGMFL PDRFVKGTCP KCKSPDQYGD NCEVCGATYS PTELIEPKSV 180
  181 VSGATPVMRD SEHFFFDLPS FSEMLQAWTR SGALQEQVAN KMQEWFESGL QQWDISRDAP 240
  241 YFGFEIPNAP GKYFYVWLDA PIGYMGSFKN LCDKRGDSVS FDKYWKKDST AELYHFIGKD 300
  301 IVYFHSLFWP AMLEGSNFRK PTNLFVHGYV TVNGAKMSKS RGTFIKASTW LNHFDADSLR 360
  361 YYYTAKLSSR IDDIDLNLED FVQRVNADIV NKVVNLASRN AGFINKRFDG VLASELADPQ 420
  421 LYKTFTDAAE VIGEAWESRE FGKAIREIMA LADLANRYVD EQAPWVVAKQ EGRDADLQAI 480
  481 CSMGINLFRV LMTYLKPVLP KLTERAEAFL NTELTWDGIQ QPLLGHKVNP FKALYNRIDM 540
  541 KQVEALVEAS KEEVKATAAP VTGPLADDPI QETITFDDFA KVDLRVALIE NAEFVEGSDK 600
  601 LLRLTLDLGG EKRNVFSGIR SAYPDPQALI GRHTIMVANL APRKMRFGIS EGMVMAAGPG 660
  661 GKDIFLLSPD AGAKPGHQVK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle