YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218695541, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPGRVNSFV SLGFLLIIIV PAFISCHARA PWIHIHQDEN GELCSNCSTI LSSMNRKEYA  60
   61 MNPYIYLGGA ILAEVIGTTL MKFSEGFTRL WPSVGTIICY CASFWLLAQT LAYIPTGIAY 120
  121 AIWSGVGIVL ISLLSWGFFG QRLDLPAIIG MMLICAGVLV INLLSRSAPH

Type	Start	End	Confidence
Cytoplasmic	1	7	0.58
Transmembrane Helix	8	31	0.81
Non-Cytoplasmic	32	62	0.62
Transmembrane Helix	63	81	0.86
Cytoplasmic	82	89	0.49
Transmembrane Helix	90	112	0.85
Non-Cytoplasmic	113	116	0.50
Transmembrane Helix	117	139	0.89
Cytoplasmic	140	144	0.54
Transmembrane Helix	145	165	0.92
Non-Cytoplasmic	166	170	0.46