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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26247572, gi|...
Protein type: Transmembrane
Type Confidence: 0.42
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGPNPGLHM LVNTSNYNEG VQKTMTNITK RSLVAAGVLA ALMAGNVALA ADVPAGVTLA  60
   61 EKQTLVRNNG SEVQSLDPHK IEGVPESNIS RDLFEGLLVS DLDGHPAPGV AESWDNKDAK 120
  121 VWTFHLRKDA KWSDGTPVTA QDFVYSWQRS VDPNTASPYA SYLQYGHIAG IDEILEGKKP 180
  181 ITDLGVKAID DHTLEVTLSE PVPYFYKLLV HPSTSPVPKA AIEKFGEKWT QPGNIVTNGA 240
  241 YTLKDWVVNE RIVLERSPTY WNNAKTVINQ VTYLPIASEV TDVNRYRSGE IDMTYNNMPI 300
  301 ELFQKLKKEI PDEVHVDPYL CTYYYEINNQ KPPFNDVRVR TALKLGMDRD IIVNKVKAQG 360
  361 DMPAYGYTPP YTDGAKLTQP EWFGWSQEKR NEEAKKLLAE AGYTADKPLT INLLYNTSDL 420
  421 HKKLAIAASS LWKKNIGVNV KLVNQEWKTF LDTRHQGTFD VARAGWCADY NEPTSFLNTM 480
  481 LSNSSMNTAH YKSPAFDSIM AETLKVTDEA QRTALYTKAE QQLDKDSAIV PVYYYVNARL 540
  541 VKPWVGGYTG KDPLDNIYTR NMYIVKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle