YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26247253, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHDWHNSKEG GIPVNKSMLA GIGIGVAAAL GVAAVASLNV FERGPQYAQV VSATPIKETV  60
   61 KTPRQECRNV TVTHRRPVQD ENRITGSVLG AVAGGVIGHQ FGGGRGKDVA TVVGALGGGY 120
  121 AGNQIQGSLQ ESDTYTTTQQ RCKTVYDKSE KMLGYDVTYK IGDQQGKIRM DRDPGTQIPL 180
  181 DSNGQLILNN KV

Type	Start	End	Confidence
Cytoplasmic	1	17	0.68
Transmembrane Helix	18	38	0.90
Non-Cytoplasmic	39	192	0.73