YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26107620, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMIAMQKNA AHTYAISSLL VLSLTGCAWI PSTPLVQGAT SAQPVPGPTP VANGSIFQSA  60
   61 QPINYGYQPL FEDRRPRNIG DTLTIVLQEN VSASKSSSAN ASRDGKTNFG FDTVPRYLQG 120
  121 VFGNARADVE ASGGNTFNGK GGANASNTFS GTLTVTVDQV LVNGNLHVVG EKQIAINQGT 180
  181 EFIRFSGVVN PRTISGSNTV PSTQVADARI EYVGNGYINE AQNMGWLQRF FLNLSPM

Type	Start	End	Confidence
Signal Peptide	1	38	0.91
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	237	0.99