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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|227884020, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSSSRKRCP KTKWALKLLT AAFLAASPAA KSAVNNAYDA LIIEARKGNT QPALLWFAQK  60
   61 SALSNNQIAD WLQIALWAGQ DKQVITVYNR YRHQQLPARG YAAVAVAYRN LQQWQNSLTL 120
  121 WQKALSLESQ NKDYQRGQIL TLADAGHYDS ALVKLKQLNS GAPDKANLLA EAYIYKLAGR 180
  181 HEDELRAMTG SLPENALTQQ YPTEYVQALR NNQLAAAIDD ANLTPDIRAD IHAELVRLSF 240
  241 MPTRSESERY AIADRALAQY AALEILWHDN SDRTAQYQRI QVDHLGALLT RDRYKDVISH 300
  301 YQRLKNTRQI IPPWAQYWVA SAYLKEQQPK KAQSIMTELF YHKETIAPDL SDEELADLFY 360
  361 SHLESENYPG ALTVTQHTIN TSPPFLRLMG TPTSIPNDTW LQGHSFLSTV AKYSNDLPQA 420
  421 EMIARELAYN APGNQGLRID YASVLQARGW HRAAENELKK AEVIEPRNIN LEVEQAWTAL 480
  481 TLQEWQQAAV LTHDVVEREP QDPGVVRLKR AVDVHNLAEL RIAGSTGIDA EGPDSGKHDV 540
  541 DLTTIVYSPP LKDNWRGFAG FGYADGQFSE GKGIVRDWLA GVEWRSRNIW LEAEYAERVF 600
  601 NHEHKPGARL SGWYDFNDNW RIGSQLERLS HRVPLRAMKN GVTGNSAQAY VRWYQNERRK 660
  661 YGVSWAFTDF SDSNQRQEVS LEGQERIWSS PYLIVDFLPN LYYEQNTEHD TPYYNPIKTF 720
  721 DIVPAFEASH LLWRSYENSW EQIFSAGVGA SWQKHYGTDV VTQLGYGQRI SWNDVIDAGA 780
  781 TLRWEKRPYD GDREHNLYVE FDMTFRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle