YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75230689
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTRVAFMTQ YSSLLRGLAA GSAFLFLFAP TAFAAEQTVE APSVDARAWI LMDYASGKVL  60
   61 AEGNADEKLD PASLTKIMTS YVVGQALKAD KIKLTDMVTV GKDAWATGNP ALRGSSVMFL 120
  121 KPGDQVSVAD LNKGVIIQSG NDACIALADY VAGSQESFIG LMNGYAKKLG LTNTTFQTVH 180
  181 GLDAPGQFST ARDMALLGKA LIHDVPEEYA IHKEKEFTFN KIRQPNRNRL LWSSNLNVDG 240
  241 MKTGTTAGAG YNLVASATQG DMRLISVVLG AKTDRIRFNE SEKLLTWGFR FFETVTPIKP 300
  301 DATFVTQRVW FGDKSEVNLG AGEAGSVTIP RGQLKNLKAS YTLTEPQLTA PLKKGQVVGT 360
  361 IDFQLNGKSI EQRPLIVMEN VEEGGFFGRM WDFVMMKFHQ WFGSWFS

Type	Start	End	Confidence
Signal Peptide	1	34	0.99
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	407	0.99