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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26107204, gi|...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYCCRTIFPA IFICVAKRLQ PSRCNASGRG ITSHNHNQNT HSCVDNIQAE NKMARAVHRS  60
   61 GLVALGIATA LMASCAFAAK EVVVAVGSNF TTLDPYDAND TLSQAVAKSF YQGLFGLDKE 120
  121 MKLKNVLAES YTVSDDGLTY TVKLREGIKF QDGTDFNAAA VKANLDRASD PANHLKRYNL 180
  181 YKNIAKTEAI DPTTVKITLK QPFSAFINIL AHPATAMISP AALEKYGKEI GFHPVGTGPY 240
  241 ELDTWNQTDF VKVKKFAGYW QPGLPKLDSI TWRPVADNNT RAAMLQTGEA QFAFPIPYEQ 300
  301 AALLEKNKNI ELMASPSIMQ RYISMNVTQK PFDNPKVREA LNYAINRPAL VKVAFAGYAT 360
  361 PATGVVPPSI AYAQSYKPWP YDPVKARELL KEAGYPNGFS TTLWSSHNHS TAQKVLQFTQ 420
  421 QQLAQVGIKA QVTAMDAGQR AAEVEGKGQK ESGVRMFYTG WSASTGEADW ALSPLFASQN 480
  481 WPPTLFNTAF YSNKQVDDFL AQALKTNDPA EKTRLYKAAQ DIIWQESPWI PLVVEKLVSA 540
  541 HSKNLTGFWI MPDTGFSFED ADLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle