YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26107180, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVIDLSYFV KIYRSKNKHI SVNFLRHFHR AGDLHLSGTT RCIYEDVIMK KCLTLLIATV  60
   61 LSGISLTAYA AQPMSNLDRG QLRPAGTVSA TGASNLSDLE DXLAEKAREQ GAKGYVINSA 120
  121 GGNDQMFGTA IIYK

Type	Start	End	Confidence
Cytoplasmic	1	51	0.74
Transmembrane Helix	52	71	0.74
Non-Cytoplasmic	72	134	0.96