YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAGP_ECOL6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSKYVAIF FFVFIQLISV GKVFANADEW MTTFRENIAQ TWQQPEHYDL YIPAITWHAR  60
   61 FAYDKEKTDR YNERPWGGGF GQSRWDEKGN WHGLYAMAFK DSWNKWEPIA GYGWESTWRP 120
  121 LADENFHLGL GFTAGVTARD NWNYIPLPVL LPLASVGYGP ATFQMTYIPG TYNNGNVYFA 180
  181 WMRFQF

Type	Start	End	Confidence
Signal Peptide	1	25	0.68
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	186	0.79