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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26106946, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFISGLDDFF IDVVYWVRRI KRKLSVYRRY PRMSYRELYK PDEKPLAIMV PAWNETGVIG  60
   61 NMAELAATTL DYENYHIFVG TYPNDPDTQR DVDEVCARFP NVHKVVCARP GPTSKADCLN 120
  121 NVLDAITQFE RSANFAFAGF ILHDAEDVIS PMELRLFNYL VERKDLIQIP VYPFEREWTH 180
  181 FTSMTYIDEF SELHGKDVPV REALAGQVPS AGVGTCFSRR AVTALLADGD GIAFDVQSLT 240
  241 EDYDIGFRLK EKGMTEIFVR FPVVDEAKER EQRKFLQHAR TSNMICVREY FPDTFSTAVR 300
  301 QKSRWIIGIV FQGFKTHKWT SSLTLNYFLW RDRKGAISNF VSFLAMLVMI QLLLLLAYES 360
  361 LWPDAWHFLS IFSGSAWLMT LLWLNFGLMI NRIVQRVIFV TGYYGLTQGL LSVLRLFWGN 420
  421 LINFMANWRA LKQVLQHGDP RRVAWDKTTH DFPSVTGDTR SLRPLGQILL ENQVITEEQL 480
  481 DTALRNRVEG LRLGGSMLMQ GLISAEQLAQ ALAEQNGVAW ESIDAWQIPS SLIAEMPASV 540
  541 ALHYAVLPLR LDNDELIVGS EDGIDPVSLA ALTRKVGRKV RYVIVLRGQI VTGLRHWYAR 600
  601 RRGHDPRAML YNAVQHQWLT EQQAGEIWRQ YVPHQFLFAE ILTTLGHINR SAINVLLLRH 660
  661 ERSSLPLGKF LVTEGVISQE TLDRVLTIQR ELQVSMQSLL LKAGLNTEQV AQLESENEGE 720
  721 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle