YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218364147, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRIILIIIG WLAVVLGTLG VVLPVLPTTP FILLAAWCFA RSSPRFHAWL LYRSWFGSYL  60
   61 RFWQKHHAMP RGAKPRAILL ILITFTISLW FVQMPWVRIM LLVILACLLF YMWRIPVIDE 120
  121 KQEKH

Type	Start	End	Confidence
Cytoplasmic	1	6	0.85
Transmembrane Helix	7	27	0.91
Non-Cytoplasmic	28	32	0.57
Transmembrane Helix	33	63	0.61
Cytoplasmic	64	71	0.96
Transmembrane Helix	72	92	0.88
Non-Cytoplasmic	93	98	0.68
Transmembrane Helix	99	117	0.93
Cytoplasmic	118	125	0.95