YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26106833, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHSNVSGGA SHGSVKTYMT GFILSIILTV IPFWMVMTGA ASPAVILGTI LAMAVVQILV  60
   61 HLVCFLHMNT KSDEGWNMTA FVFTVLIIAI LVVGSIWIMW NLNYNMMMH

Type	Start	End	Confidence
Cytoplasmic	1	16	0.85
Transmembrane Helix	17	37	0.91
Non-Cytoplasmic	38	43	0.71
Transmembrane Helix	44	66	0.91
Cytoplasmic	67	77	0.76
Transmembrane Helix	78	100	0.92
Non-Cytoplasmic	101	109	0.88