YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26106814, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFHSRKGF SNSGIHMKKT LLAAGAVLAL SSSFTVNAAE NDKPQYLSDW WHQSVNVVGS  60
   61 YHTRFGPQLR NDTYLEYEAF AKKDWFDFYG YADAPVFFGG NSDAKGIWNH GSPLFMEIEP 120
  121 RFSIDKLTNT DLSFGPFKEW YFANNYIYDM GRNKDGRQST WYMGLGTDID TGLPMSLSMN 180
  181 VYAKYQWQNY GAANENEWDG YRFKVKYFVP ITDLWGGQLS YIGFTNFDWG SDLGDDSGYA 240
  241 NNGIKTRTNN SIASSHILAL NYDHWHYSVV ARYWHNGGQW NDDAELNFGN GNFNVRSTGW 300
  301 GGYLVVGYNF

Type	Start	End	Confidence
Signal Peptide	1	38	0.99
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	310	0.99