YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110342162, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKRYLGKSG LEVSALGLGC MGLSHGYGPA TDTRQAIELI RAAVERGVTF FDTAEVYGPY  60
   61 LNEEVVGEAL KPFRDRVVIA TKFGFTFGND NKQQILNSRP EHIREAVEGS LRRLKTDVID 120
  121 LLYQHRVDPD VPIEDVAGTV KDLIAEGKVK HFGLSEAGAQ TIRRAHAVQP VTALQSEYSM 180
  181 WWREPEQEIL PLLEELGIGF VPFSPLGKGF LTGAIKPGTT FGKDDYRSTV PRFAAQAIEA 240
  241 NEKLVTLLGE LAAEKGVTSA QIALAWLLAQ KPWIVPIPGT TKLHRLEENL AAADIVLSQK 300
  301 DTQQISEALE TIKIVGERYS PEHQARVGR

Type	Start	End	Confidence
Signal Peptide	1	26	0.74
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	329	0.99