YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26246158, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVSRTIWR VIAVLIAVIY VRLVVLQFDS ITGSLPEMLK QVEIFTDGSC LGNPGPGGYG  60
   61 AILRYRGREK TFSAGYTRTT NNRMELMAAI VALEALKEHC EVILSTDSQY VRQGITKWIH 120
  121 NWKKRGWKTA DKKPVKNVDL WQRLDAALGQ HQIKWEWVKG HAGHPENERC DELARAAAMN 180
  181 PTLEDTGYQV EV

Type	Start	End	Confidence
Cytoplasmic	1	6	0.83
Transmembrane Helix	7	26	0.83
Non-Cytoplasmic	27	192	0.86