YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|227884935, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSKTAQPK HSLRKIAVVV ATAVSGMSVY AQAAVEPKED TITVTAAPAP QESAWGPAAT  60
   61 IAARQSATGT KTDTPIQKVP QSISVVTAEE MALHQPKSVK EALSYTPGVA VGTRGASNTY 120
  121 DYLIIRGFAA DGQSQNNYLN GLKLQGNFYN DAVIDPYMLE RAEIMRGPVS VLYGKSSPGG 180
  181 LLNMVSKRPT TEPLKEVQFK AGTDSLFQTG FDFSDALDDD GVYSYRLTGL ARSANAQQKG 240
  241 SEEQRYAIAP AFTWRPDDKT NFTFLSYFQN EPETGYYGWL PKEGTVEPLP NGKRLPTDFN 300
  301 EGAKNNTYSR NEKMIGYSFD HEFNDTFTVR QNLRFAQNKV SQKSVYGYGM CSDPLYTKDQ 360
  361 EALKASPCLS IPQSQWGHTL TRQYVIDNEK LENFSVDTQL QSKFATGSVD HTLLTGVDFM 420
  421 RMRNDIDSWF GYAGSVAPSD IYNLDRSDFD FGAHPNPSGP YRVLLKQKQT GLYVQDQAQW 480
  481 DKVLVTLGGR YDWADQSSFN RDYGNKSERD DKEFTWRGGV NYLFDNGVTP YFSYSESFEP 540
  541 ASQTDANGDL FAPSKGKQYE VGVKYVPEDR PIVVTGALYQ LTKTNNLMAD PNGSLFSVEG 600
  601 GEIRARGVEL EAKAALSASV NVVGSYTYTD AEYTTDTTYK GNTPAQVPKH MASLWADYTF 660
  661 FDGPLSGLTL GTGGRYTGSS YGDPANSFKV GSYTVVDALV RYDLARVGMA GSNVALHVNN 720
  721 LFDREYVASC FNTYGCFWGA ERQVVATATF RF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle