YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117622427, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFNTKHTAA LCLASCMAFS SSAIADIVIS GTRVVYKSEQ KSVNVRLENK GNNPLLVQSW  60
   61 LDTGDDNAEP GSITVPFTAT PPVSRIDAKR GQTIKLMYTA SSALPKDRES VFWFNVLEVP 120
  121 PKPDAAKAAN QSLLQLAFRT RIKLFYRPEG LSGISSDAPL ALKWSWATSE GKAALRVDNP 180
  181 TPYYVSFSSG DLEANGKRYP LDMTMIAPFS NDVIKVNGMS GRTSSAKVHF FAINDFGGSI 240
  241 EGNANL

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	246	0.99