YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25027480, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIDWVIRIM EALGAPGVGI AVFLENVFPP IPSELVLPLA GFTASQGEFN VWAALIASVI  60
   61 GSVSGAYLLY YVGQAFGAER LRRIADWMWL VEPKDVDDAL AWFDKYGTWS VFFGRLVPGV 120
  121 RSLISIPAGI DRMNPLVFGA LTTVGSLIWN TILIWAGVWL GEEWETVTRA FESYSSVVYV 180
  181 LIALILVGVV LHLLRRHNKR LKKDTTGEST DTATGETTGD AVTDPTGGAT DSGAGSTRRQ 240
  241 R

Type	Start	End	Confidence
Cytoplasmic	1	8	0.87
Transmembrane Helix	9	31	0.81
Non-Cytoplasmic	32	50	0.88
Transmembrane Helix	51	73	0.94
Cytoplasmic	74	135	0.95
Transmembrane Helix	136	158	0.91
Non-Cytoplasmic	159	174	0.87
Transmembrane Helix	175	194	0.95
Cytoplasmic	195	241	0.99