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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24377930, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTEQETMQ GIEKLVSDDV YEAAQTSSNG LEASQVQKRQ ELYGLNRLNE VKGEPVWLKF  60
   61 IKNFTSMMAL LLWAGGAVAF FSGTIELGIA IWLVNVINGL FSFFQEYRAS QATEALKKML 120
  121 PSYARVIRDG RESKILAEEL VPGDVMLIEE GDAISADGRI IFSTDLQVNQ SALTGESNPV 180
  181 RKNNYPVLDS DTENLEFKNM VFAGTSVSNG SAKVVVTKIA MATEFGKIAD LTQSMEDEKS 240
  241 PLQKELDLLT KQISLIAVTI GIFFLLASVF FVKQPLAQAF IFSLGMIVAF IPEGLLPTVT 300
  301 LSLAMAVQRM AKEHALVKKL SSVETLGATS VICSDKTGTL TQNEMTVNHV WTLNHEYEVT 360
  361 GQGYASDGHL ERNNQEVTVA NEEGLEFLLR AAALCSNARV LAPSDGNPRY TVLGDPTEAC 420
  421 LNVVAEKAGI DLTENETWAQ RVRELPFDSS RKRMTTVHRL KQPVNGSSFI SITKGAPKET 480
  481 SELCNKVYEN GQLRDLTDTD REAILAANDD YARQGLRVLA VAYRNLEEVA DLPKALSDYS 540
  541 PEVIEEDMVF QGLVVMADPP REEVAAAVEL CRKASIRIVM VTGDYGLTAV SIAKRIGIVQ 600
  601 GENPRVVTGL ELKDMSDDDL KQALSDEVVF ARVAPEQKYR VVTNLQALGH VVAVTGDGVN 660
  661 DAPALKKADI GVAMGITGTD VAKESADMIL TDDNFASIVR AVEEGRAVYT NIRKFLTYIF 720
  721 NSNTSEAVPS AAFLFSKGGI PLPLTVMQIL AIDLGTDMIP ALGLGVEEAE DGIMERPPRR 780
  781 PTDRLLNKGL LIKAFIWYGL LEAAIAMGAF FFTYAIGGGL SGHLASSGQL YQQATTMTLG 840
  841 AIIFCQLGMV MNTRTEKASI FKVKLFSNKV INFGMMFEIF LFCLLAYLPF LHGLFNTAAI 900
  901 GVWHWLYLIL CPIPVLFIEE ARKAYMRRKH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle