YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115456133, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSGEASLG GFKIGPSTLV GRGVAIRVLL LSSLWRLRER AYAAASRVRG AALPVVAPWL  60
   61 HLRNTHGILL VVVLFALFLR RLSGARSRAA LARRRLQCKK AMRYAASYEE WARAAKVLDK 120
  121 MSEQVSESDF YDEELIRNRL EELRRRREEG SLRDVVFCMR GDLVRNLGNM CNPELHKGRL 180
  181 EVPKLIKDYI DEVSAQLKMV CESDTDDLLL EEKLAFVQET RHAFGRTALL LSGGASLGSF 240
  241 HVGVVKTLVE HKLLPRIVAG SSVGSIICSI VATRTWPEIQ SFFVDSLQTL QFFDRIGGIF 300
  301 AVTKRVMTYG ALHDISQMQR LLRDLTGNLT FQEAYDMTGR VLGVTVCSPR KNEPPRCLNY 360
  361 LTSPHVVIWS AVTASCAFPG LFEAQELMAK NRFGEIVPFH APFSTDPEQG PGASKRRWRD 420
  421 GSLEMDLPMM QLKELFNVNH FIVSQTNPHI SPLLRLKEIV TTYGGRFAGK LARLAEMEVK 480
  481 YRCNQILEIG LPLGGLAKLF AQDWEGDVTM VMPATAAQYL KIIQNPTYAE LQMAANQGRR 540
  541 CTWEKISAIR TNCAIELALD ESIAVLNHKR RLKRSMERVA SASQGYTCSS VIRTPRRVPS 600
  601 WSCISRENST GSLSEDCFAT TSSSTHQGIQ VVATPNVIHN DGSESESETI DLNSWTRSGG 660
  661 PLMRTSSADM FINFIQNLEI ESEFNTGNSS GSTVSKDSCP NNNSGVTAQG TDRSTDTSET 720
  721 GSCNTGNNIA SQPSTSTSIA VSEGELLQPE RSTNGILINV VKRKSVFGEH ESEAETESYV 780
  781 DTTNLDTSDC PGDNKDAADS NDLSAAHTDS VTSQHSSADE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle