YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24376101, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGLSFRGR QNVHGPFRAI IIFSLLVLAI ATASRIGLGL WQAERVAAVD GWSHLLLQGI  60
   61 RVDIATLCWL WGLAALGTAL FSGDHLIGRV WQWILRLWLT LGLWAILFLE VSTPAFIEEY 120
  121 GIRPNRLYVE YLIYPKEVLS MLWAGRKLEL IFSVVLSIAT LWGGWVLSGK LSKNLRFPRW 180
  181 YWRPVLAVLV IVVTLLGARS TLGHRPLNPA MVAFADDPLV NSLVINSAYS LVFAIKQMGS 240
  241 EEDASEVYGS LDKAEIIATI RQESGRPESA FTSNEIPSLS FNQASFTGKP KNLVILLQES 300
  301 LGARFVGSLG GLPLTPNIDA LSQEGWYFDN LYATGTRSVR GIEAVTTGFT PTPARAVVKL 360
  361 GKSQTGFFSI AELLKYHGYT TQFIYGGESH FDNMRSFFLG NGFSDIIDQK DYKSPAFVGS 420
  421 WGVSDEDLMR KANSEFERLH SEGKPFFSLV FSSTNHDPFE FPDGRIELYE QPKQTRNNAA 480
  481 KYADYAIGEF FKLAKNADYW KDTIFIVVAD HDSRVGGADL VPVSRFRIPG LILGDNVAPK 540
  541 RDHRIVSQID LPPTLLSLIG ISGSYPMLGR DLTQVSEDWP GRAMMQYDKN FALMEGKDVV 600
  601 ILQPEKEAQG FQYDEKTEHL TPYAPAAQAL EKKALSWALW GSLAYQQELY RSGNSSNSNK 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle