YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24351103, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNLPKQPRI KSNRRLISLL VLGCLAMFAF GFALVPLYDV LCEKLGINGK TSNTASSYQA  60
   61 ITVDKNRVVT VEFISQIQTG MPWKFEPQTK RLEVHPGELI HTAFLAQNLS NRPIVGQAIP 120
  121 SVSPGQGAAY FNKTECFCFN QQHLAAASRA ELPLIFFVDP QLPESIHTLT LSYTLYDITD 180
  181 KQLASAIEQG AAK

Type	Start	End	Confidence
Signal Peptide	1	33	0.90
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	193	0.99