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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375993, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCKAFKKST IAAIVSSLLI SSAYAAADAE SSEPIERITV YGEKIERSLK DTTSSISVID  60
   61 KETLDSGQYQ STSSALSEVP NVVVLSGSVP DIRGVSGNGS ASGFNSFTGG ARARVSTLVD 120
  121 GVAEPFVADL SGDTGLWDIQ QIEVFRGPQS TINGRNSIGG TVFIKTEDPT FDWQGAARVG 180
  181 YRDQDNFIDS AVMLSGPILD DELAFRVSGQ NVTGETYNKG LEYPTNPATF DQNELITNRW 240
  241 RGKFLWQPSA IEDLKVLYSL SYNDEKGDSG RNYFTGDDPW AYKPIFQRYI ETKSTTHSVK 300
  301 VDYELGEGQA FDLIVAYMDY NWGFESYEAL ATAQQYVDMK DKSYTVDGKY SFGLKDKDFN 360
  361 GFVGLAYFKR SQDFGSTGSS IYSGDDSTKS ASVYGEVTYG LADSLWITVG GRVMREEQLR 420
  421 NFTMLYQGSQ LLEKLDDANT VTLPKLVLQY ALNDNTTLAA SVRRGYNSGG GALSLVESEY 480
  481 YYYDEEFVNT YELSSRSAFA NGDVNLSANL FYNDFDGYQA SNSARKITNI DKAVSYGVEA 540
  541 EFSAMLTENW QFISGVGLLD SEIKQADPSY GDIIGNQLNS APHVTANAGL KYWLSDAFSF 600
  601 GFAGHYVGEY FADINNTESR VAGDYVVARV SLDYQTDSWR VSGFVNNLFD EQAMTVNEPA 660
  661 SRSYPDGYAA IIDPRNIGVS AMYRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle