YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375926, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLSRLGKV FGLVLSFSMV LMPFISRAET VPAIAAAANI KFALDDIVKN FSAETGLKVR  60
   61 VSYGSSGNFV AQIQHGAPFE MLLSADERYI HELQKAGFAR DEGVQYAVGR LALVAPNKSP 120
  121 LTLDTELNGV KVLLAAGKLE RFAIANPEHA PYGERARELL QKLGLWDGLQ TKLILGENAS 180
  181 QAAQFAVSGS TQGGIIPLSI ALAPQFKALG QSIALPAELH GPLYQRMVLT PKAGATAERF 240
  241 YLYLQSDAAK SVFVQYGFGL PAQ

Type	Start	End	Confidence
Signal Peptide	1	28	0.99
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	263	0.99