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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24350835, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQNYEHYLF LFVIITGLIM GVISYFGFRA LTQESTLNEY QTQQLAKSHV AQTQSFILQQ  60
   61 LNQKQVRLDA MLAYLSLDKN ALHTLISQDS DIENIFVLQK NKLAFPDISQ PLSLKDQTLA 120
  121 ELIMPISHDP TLLMAKQPTS EDKSPNSGWL VLQDNNYPAL IYWRKTDEDT VGIKLSYVKF 180
  181 LADVISALDT NFTPDGIKIS DNGQVLYQLS PEPIGNNQTP SYSQNLPFPL HGWQIDYYTA 240
  241 PVKGQSLYYL GTILIVTIIL AVGFMAFMLY REFNRATRLA SQQVSFVGQV SHELKTPLTN 300
  301 ITLYAEMLNE MEAEENDQRA HYLGVIISES QRLSRLIQNV LTFTKLPQIC IRQVDINQLM 360
  361 NQIYTAFKPV FEAKEIHLNL NINGQLSTKT DVDLVTQIIS NLLSNAEKYA ATGKQVDLNV 420
  421 EQDNDNIFIH IRDYGNGITA KELKQIFQPF YRVRSSITEG VSGTGIGLTI ARQLAETLSG 480
  481 EINAINNEPG MTFTLRLPKR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle