YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375772, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRKRKDRL LYCAIWGSAG ITILFLLWVV WHILANGLSH VSWEFITGAY TRIGEISGIW  60
   61 AMIVSTVYMV LLSLTFAAPI GIMTAIYLTE YASPVSKVVR VIRFCTESLA GIPSIVYGLF 120
  121 GMTFFVTQLG LGFSILSGAL TLAMLILPVI IRTTEEALMS VPMSYREGGY ALGCSKIYII 180
  181 WRLILPSALP GIVNSIILST GRVVGESAPV FLTAGMVTQI PESVMDSGRT LTVHLYKLTQ 240
  241 ELFTQNEWDQ AYATATILIV LVLMLNLATK LIATKLNK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.92
Transmembrane Helix	12	35	0.92
Non-Cytoplasmic	36	63	0.89
Transmembrane Helix	64	88	0.85
Cytoplasmic	89	100	0.89
Transmembrane Helix	101	121	0.88
Non-Cytoplasmic	122	130	0.61
Transmembrane Helix	131	151	0.93
Cytoplasmic	152	177	0.88
Transmembrane Helix	178	201	0.76
Non-Cytoplasmic	202	250	0.94
Transmembrane Helix	251	273	0.89
Cytoplasmic	274	278	0.94